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Fisher AE, Triplett J, Ho C-S, Schiller A D, Oltrogge K A, Schroeder E S, Kelchner SA, Clark LG (2009) Paraphyly in the bamboo subtribe Chusqueinae (Poaceae: Bambusoideae) and a revised infrageneric classification for Chusquea. Systematic Botany 34:1-11.


Simon DM, Kelchner SA, Zimmerly S (2009) A broad-scale phylogenetic analysis of group II intron RNAs and intron-encoded reverse transcriptases. Molecular Biology and Evolution  26:2795-2808. Simon_etal_MBE2009.pdf


Duffy AM, Kelchner SA, Wolf PG (2009) Conservation of selection on matK in ferns following an ancient loss of the trnK intron by genome inversion. Gene 438:17-25. Duffy_etal_Gene2009.pdf


Kelchner SA (2009) “Phylogenetic Trees Made Easy, 3rd Edition” by Barry Hall [review]. Systematic Botany 34:243.  Kelchner_SystBot2009.pdf


Kelchner SA (2009) Phylogenetic models and model selection for noncoding DNA. Plant Systematics and Evolution 282:109-126.  Kelchner_PSE2009.pdf


Watts CD, Fisher AE, Shrum CD, Newbold WL, Hansen S, Liu C, Kelchner SA (2008) The D4 Set: primers that target highly variable intron loops in plant chloroplast genomes. Molecular Ecology Resources 8:1344-1347. Watts_etal_2008.pdf

[ correction, p. 1346: annealing temp is 95C, not 65C ]


Kelchner SA, Thomas MA (2007) Model use in phylogenetics: nine key questions. Trends in Ecology and Evolution 22:87-94.  Kelchner&Thomas_TREE2007.pdf


Bamboo Phylogeny Group (2006) The Bamboo Phylogeny Project. Bamboo 27(6):11-14. BPG_article.pdf


Tank DC, Beardsley PM, Kelchner SA, Olmstead RG (2006) Review of the systematics of Scrophulariaceae s.l. and its current disposition. L.A.S. Johnson Review No. 7, Australian Systematic Botany 19:289-307.  Tank_etal_2006.pdf


Trueman JWH, Pfeil BE, Kelchner SA, Yeates DK (2004) Did stick insects really regain their wings? Systematic Entomology 29:138-139. 


Kelchner SA (2002) Group II introns as phylogenetic tools: structure, function, and evolutionary constraints. American Journal of Botany 89:1651-1669.  Kelchner_AJB2002.pdf


Kelchner SA (2002) "Molecular systematics and plant evolution" [review]. Systematic Biology 51:382-384.  Kelchner_SystBiol2002.pdf


Kelchner SA (2000) The evolution of non-coding chloroplast DNA and its application in plant systematics. Annals of the Missouri Botanical Garden 87:482-498.  Kelchner_AMBG2000.pdf


Bayer RJ, Puttock CF, Kelchner SA (2000) Phylogeny of South African Gnaphalieae (Asteraceae) based on two non-coding chloroplast sequences. American Journal of Botany 87:259-272.


Kelchner SA, Clark LG (1997) Molecular evolution and phylogenetic utility of the rpl16 intron in Chusquea and the Bambusoideae (Poaceae). Molecular Phylogenetics and Evolution 8:385-397.  Kelchner&Clark_MPE1997.pdf

 

Kelchner SA, Wendel JF (1996) Hairpins create minute inversions in non-coding regions of chloroplast DNA. Current Genetics 30:259-262.  Kelchner&Wendel_1996.pdf


Kelchner SA (1992) American robins' use of old nests as cues for nest-site selection in central Iowa. Iowa Bird Life 62:32-34.

matK in Adiantum (Duffy et al.)

The D4 primer set (Watts et al.)

Group II intron evolution (Kelchner ‘02)

Chusquea phylogeny (Kelchner & Clark)

Hairpin inversions (Kelchner & Wendel)